Pseudomonas aeruginosa PAO1, PA0929

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006810	transport	ISS Inferred from Sequence or Structural Similarity	ECO:0000044 sequence similarity evidence
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00383	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00383	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00072	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other PAO1 genes in this class Transport of small molecules Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Two-component System		ECO:0000037 not_recorded
KEGG	pae02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00862	Trans_reg_C_3	IPR001867	OmpR/PhoB-type DNA-binding domain	158	235	5.8E-20
Pfam	PF00486	Transcriptional regulatory protein, C terminal	IPR001867	OmpR/PhoB-type DNA-binding domain	164	235	3.2E-18
Gene3D	G3DSA:6.10.250.690	-	-	-	94	125	1.1E-14
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	12	119	2.7E-25
CDD	cd00383	trans_reg_C	IPR001867	OmpR/PhoB-type DNA-binding domain	164	235	1.82818E-21
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	154	235	1.22E-15
PANTHER	PTHR48111	REGULATOR OF RPOS	IPR039420	Transcriptional regulatory protein WalR-like	10	235	1.7E-44
Gene3D	G3DSA:3.40.50.2300	-	-	-	10	93	8.2E-20
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	7	178	3.13E-39
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	9	119	8.4E-42
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	140	238	1.4E-20
CDD	cd17625	REC_OmpR_DrrD-like	-	-	12	125	1.04713E-62
FunFam	G3DSA:3.40.50.2300:FF:000002	DNA-binding response regulator PhoP	-	-	9	87	1.1E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.