Pseudomonas aeruginosa PAO1, PA0944 (purN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071978 bacterial-type flagellum-dependent swarming motility
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
17158671 Reviewed by curator
Biological Process GO:0009117 nucleotide metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Molecular Function GO:0000104 succinate dehydrogenase activity
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0044010 single-species biofilm formation
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
17158671 Reviewed by curator
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53328
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006189 'de novo' IMP biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00639
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004644 phosphoribosylglycinamide formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00639
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Nucleotide biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCyc PRPP-PWY superpathway of histidine, purine, and pyrimidine biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCAP Purine metabolism ECO:0000037
not_recorded
PseudoCAP One carbon pool by folate ECO:0000037
not_recorded
PseudoCyc DENOVOPURINE2-PWY superpathway of purine nucleotides de novo biosynthesis II 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 6 204 6.15E-67
NCBIfam TIGR00639 JCVI: phosphoribosylglycinamide formyltransferase IPR004607 Phosphoribosylglycinamide formyltransferase 6 194 1.6E-77
PANTHER PTHR43369 PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE - - 4 203 1.2E-65
FunFam G3DSA:3.40.50.170:FF:000005 Phosphoribosylglycinamide formyltransferase - - 5 216 4.3E-106
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 6 184 2.9E-66
CDD cd08645 FMT_core_GART IPR004607 Phosphoribosylglycinamide formyltransferase 6 188 2.57376E-105
Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. IPR004607 Phosphoribosylglycinamide formyltransferase 6 191 32.699547
Gene3D G3DSA:3.40.50.170 - - - 2 206 1.5E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.