Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0034762 | regulation of transmembrane transport | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
19497948 | Reviewed by curator |
Biological Process | GO:0043902 | positive regulation of multi-organism process | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
15686549 | Reviewed by curator |
Biological Process | GO:0051349 | positive regulation of lyase activity | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
14739337 | Reviewed by curator |
Molecular Function | GO:0000976 | transcription regulatory region sequence-specific DNA binding | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
16735731 | Reviewed by curator |
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pae02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:3.40.190.290:FF:000026 | Transcriptional regulator MvfR | - | - | 94 | 309 | 0.0 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 3 | 78 | 7.07E-13 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 6 | 64 | 1.6E-10 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 139 | 292 | 2.5E-14 |
CDD | cd05466 | PBP2_LTTR_substrate | - | - | 102 | 286 | 1.81721E-14 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 4 | 81 | 1.7E-14 |
PANTHER | PTHR30579 | TRANSCRIPTIONAL REGULATOR | - | - | 1 | 301 | 2.7E-70 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 140 | 296 | 1.16E-18 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 94 | 309 | 1.5E-102 |