Pseudomonas aeruginosa PAO1, PA1041

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01021
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 136 151 2.6E-17
Gene3D G3DSA:3.30.1330.60 IPR036737 OmpA-like domain superfamily 90 210 8.2E-40
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 5.0
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 105 127 2.6E-17
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 100 207 2.1933E-48
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 105 201 5.8E-24
SUPERFAMILY SSF103088 IPR036737 OmpA-like domain superfamily 78 207 1.44E-35
PRINTS PR01021 OMPA domain signature IPR006664 Outer membrane protein, bacterial 151 167 2.6E-17
ProSiteProfiles PS51123 OmpA-like domain profile. IPR006665 OmpA-like domain 92 210 50.016

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.