Pseudomonas aeruginosa PAO1, PA1074 (braC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1903805 L-valine import across plasma membrane
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:1903806 L-isoleucine import across plasma membrane
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:0015803 branched-chain amino acid transport
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
2509433 Reviewed by curator
Biological Process GO:0015808 L-alanine transport
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:0042941 D-alanine transport
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
18833300 Reviewed by curator
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00337
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.2300 - - - 148 276 1.8E-121
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 92 102 3.8E-52
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 30 46 3.8E-52
Pfam PF13458 Periplasmic binding protein IPR028081 Leucine-binding protein domain 29 366 3.1E-68
CDD cd06342 PBP1_ABC_LIVBP-like - - 31 363 0.0
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 28 366 4.97E-100
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 333 348 3.8E-52
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 281 294 3.8E-52
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 258 276 3.8E-52
Gene3D G3DSA:3.40.50.2300 - - - 31 351 1.8E-121
PANTHER PTHR47151 LEU/ILE/VAL-BINDING ABC TRANSPORTER SUBUNIT - - 2 373 2.4E-127
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 52 68 3.8E-52
PRINTS PR00337 Leu/Ile/Val-binding protein family signature IPR000709 Leu/Ile/Val-binding protein 71 89 3.8E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.