Pseudomonas aeruginosa PAO1, PA1076

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Shine-Dalgarno sequence 1163265 1163267 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details
Shine-Dalgarno sequence 1163648 1163652 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AAAGGCCCGATATCG-N1-CGATATCGGGCCTTT 1164052 1164082 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CGGCAAGCGG-N10-CCGCTTGCCG 1164127 1164156 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: CGGAAGCGGC-N9-GCCGCTTCCG 1164134 1164162 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 300 1164055 1164079 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Shine-Dalgarno sequence 1164263 1164265 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details