Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 85 | 9.9E-22 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 96 | 286 | 2.2E-38 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 87 | 3.7E-25 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 87 | 284 | 9.15E-33 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 5 | 61 | 3.6E-23 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 87 | 284 | 6.2E-39 |
NCBIfam | TIGR03339 | JCVI: aminoethylphosphonate catabolism associated LysR family transcriptional regulator | IPR017724 | Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type | 5 | 284 | 1.2E-121 |
PANTHER | PTHR30126 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 1 | 284 | 4.2E-61 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 29 | 39 | 4.0E-8 |
CDD | cd05466 | PBP2_LTTR_substrate | - | - | 99 | 284 | 2.04292E-38 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 84 | 9.54E-23 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 39 | 50 | 4.0E-8 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 18 | 29 | 4.0E-8 |