Pseudomonas aeruginosa PAO1, PA1443 (fliM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0009425 bacterial-type flagellum basal body
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 8757287 Reviewed by curator
Molecular Function GO:0003774 motor activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 8757287 Reviewed by curator
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 8757287 Reviewed by curator
Cellular Component GO:0009425 bacterial-type flagellum basal body
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00955
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003774 motor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00955
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00955
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class
Motility & Attachment Other PAO1 genes in this class
Chemotaxis Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Flagella assembly ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd17908 FliM IPR001689 Flagellar motor switch protein FliM 48 227 1.06198E-71
Gene3D G3DSA:3.40.1550.10 - IPR028976 CheC-like superfamily 44 230 1.4E-56
Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IPR001543 Flagellar motor switch protein FliN-like, C-terminal domain 251 319 7.2E-17
PIRSF PIRSF002888 FliM IPR001689 Flagellar motor switch protein FliM 3 323 1.5E-91
PRINTS PR00955 Flagellar motor switch protein FliM signature IPR001689 Flagellar motor switch protein FliM 211 229 3.4E-21
PRINTS PR00955 Flagellar motor switch protein FliM signature IPR001689 Flagellar motor switch protein FliM 89 105 3.4E-21
NCBIfam TIGR01397 JCVI: flagellar motor switch protein FliM IPR001689 Flagellar motor switch protein FliM 5 319 7.7E-109
PRINTS PR00955 Flagellar motor switch protein FliM signature IPR001689 Flagellar motor switch protein FliM 114 133 3.4E-21
PRINTS PR00955 Flagellar motor switch protein FliM signature IPR001689 Flagellar motor switch protein FliM 4 17 3.4E-21
SUPERFAMILY SSF101801 Surface presentation of antigens (SPOA) IPR036429 SpoA-like superfamily 247 322 3.14E-14
SUPERFAMILY SSF103039 CheC-like IPR028976 CheC-like superfamily 6 230 1.28E-19
FunFam G3DSA:3.40.1550.10:FF:000001 Flagellar motor switch protein FliM - - 44 230 1.6E-118
Gene3D G3DSA:2.30.330.10 - IPR036429 SpoA-like superfamily 241 323 1.4E-9
PANTHER PTHR30034 FLAGELLAR MOTOR SWITCH PROTEIN FLIM - - 1 320 7.4E-106
Pfam PF02154 Flagellar motor switch protein FliM IPR001689 Flagellar motor switch protein FliM 38 229 4.6E-75

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.