Pseudomonas aeruginosa PAO1, PA1448 (fliR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009306 protein secretion
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
10049367 Reviewed by curator
Cellular Component GO:0009288 bacterial-type flagellum
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
8282695 Reviewed by curator
Cellular Component GO:0016021 integral component of membrane
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
8282695 Reviewed by curator
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01400
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30065
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006605 protein targeting
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30065
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other PAO1 genes in this class
Motility & Attachment Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Flagella assembly ECO:0000037
not_recorded
KEGG pae02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 81 100 1.0E-27
PANTHER PTHR30065 FLAGELLAR BIOSYNTHETIC PROTEIN FLIR IPR002010 Type III secretion system inner membrane R protein 3 256 9.2E-77
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 202 221 1.0E-27
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 22 43 1.0E-27
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 180 202 1.0E-27
NCBIfam TIGR01400 JCVI: flagellar biosynthetic protein FliR IPR006303 Flagellar biosynthesis protein FliR 14 255 9.8E-82
Pfam PF01311 Bacterial export proteins, family 1 IPR002010 Type III secretion system inner membrane R protein 14 243 1.7E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.