Pseudomonas aeruginosa PAO1, PA1467
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PIRSF | PIRSF016838 | PafC | IPR028349 | Protein PafC | 64 | 320 | 2.9E-23 |
| PANTHER | PTHR34580 | - | - | - | 3 | 312 | 1.1E-62 |
| PIRSF | PIRSF016838 | PafC | IPR028349 | Protein PafC | 1 | 55 | 0.073 |
| Pfam | PF08279 | HTH domain | IPR013196 | Helix-turn-helix, type 11 | 7 | 62 | 1.2E-15 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 7 | 64 | 1.22E-9 |
| Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 4 | 65 | 6.2E-12 |
| Pfam | PF13280 | WYL domain | IPR026881 | WYL domain | 142 | 310 | 1.7E-33 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.