Pseudomonas aeruginosa PAO1, PA1490

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF08220	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF08220	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR30363	HTH-TYPE TRANSCRIPTIONAL REGULATOR SRLR-RELATED	-	-	1	250	3.8E-59
CDD	cd00090	HTH_ARSR	IPR011991	ArsR-like helix-turn-helix domain	5	55	1.10201E-5
PRINTS	PR00037	LacR bacterial regulatory protein HTH signature	IPR001034	DeoR-type HTH domain	38	56	4.3E-9
SMART	SM01134	DeoRC_2	-	-	73	232	4.9E-63
SMART	SM00420	deor2	IPR001034	DeoR-type HTH domain	6	58	9.2E-16
Pfam	PF08220	DeoR-like helix-turn-helix domain	IPR001034	DeoR-type HTH domain	6	59	2.7E-17
Pfam	PF00455	DeoR C terminal sensor domain	IPR014036	DeoR C-terminal sensor domain	75	231	1.6E-46
SUPERFAMILY	SSF100950	NagB/RpiA/CoA transferase-like	IPR037171	NagB/RpiA transferase-like	75	232	4.71E-26
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	4	77	2.25E-15
PRINTS	PR00037	LacR bacterial regulatory protein HTH signature	IPR001034	DeoR-type HTH domain	24	38	4.3E-9
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	3	73	2.9E-9
Gene3D	G3DSA:3.40.50.1360	-	-	-	74	226	2.1E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.