Pseudomonas aeruginosa PAO1, PA2479 (dsbR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00486
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00486
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class
Two-component regulatory systems Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Two-component System ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 145 216 3.1E-25
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1 112 2.1E-31
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 145 216 1.2E-20
Gene3D G3DSA:3.40.50.2300 - - - 1 80 5.8E-14
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 3 112 1.2E-24
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 172 1.66E-34
Gene3D G3DSA:6.10.250.690 - - - 81 118 7.1E-14
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 123 217 2.0E-27
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 132 216 3.98435E-29
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 1 219 5.3E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.