Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Pfam | PF02311 | AraC-like ligand binding domain | IPR003313 | AraC-type arabinose-binding/dimerisation domain | 18 | 79 | 6.8E-7 |
PANTHER | PTHR11019 | HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR | - | - | 3 | 250 | 3.3E-78 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 230 | 246 | 7.4E-6 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 170 | 246 | 1.9E-22 |
SMART | SM00342 | aracneu4 | IPR018060 | DNA binding HTH domain, AraC-type | 164 | 246 | 3.7E-21 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 146 | 251 | 5.9E-22 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 201 | 247 | 3.09E-8 |
FunFam | G3DSA:1.10.10.60:FF:000132 | AraC family transcriptional regulator | - | - | 145 | 249 | 2.2E-36 |
CDD | cd06124 | cupin_NimR-like_N | - | - | 10 | 101 | 7.82036E-26 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 215 | 230 | 7.4E-6 |
SUPERFAMILY | SSF51182 | RmlC-like cupins | IPR011051 | RmlC-like cupin domain superfamily | 20 | 212 | 7.29E-14 |
Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 16 | 87 | 1.5E-6 |