Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00039
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.40.190.10 | - | - | - | 160 | 256 | 3.9E-45 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 30 | 40 | 7.2E-8 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 94 | 263 | 3.9E-45 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 110 | 3.32E-24 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 84 | 5.5E-27 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 6 | 63 | 4.2E-21 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 90 | 283 | 1.99E-28 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 40 | 51 | 7.2E-8 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 88 | 281 | 2.0E-29 |
PANTHER | PTHR30579 | TRANSCRIPTIONAL REGULATOR | - | - | 1 | 285 | 4.3E-81 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 19 | 30 | 7.2E-8 |
FunFam | G3DSA:1.10.10.10:FF:000001 | LysR family transcriptional regulator | - | - | 1 | 85 | 4.7E-26 |
FunFam | G3DSA:3.40.190.10:FF:000069 | HTH-type transcriptional regulator lrhA | - | - | 160 | 256 | 4.2E-37 |