Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3141
|
Name |
wbpM
|
Replicon | chromosome |
Genomic location | 3524681 - 3526678 (- strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_251831.1 |
GI | 15598337 |
Affymetrix | PA3141_wbpM_g_at |
Entrez | 882583 |
GenBank | AAG06529.1 |
INSDC | AAG06529.1 |
NCBI Locus Tag | PA3141 |
protein_id(GenBank) | gb|AAG06529.1|AE004738_3|gnl|PseudoCAP|PA3141 |
TIGR | NTL03PA03141 |
UniParc | UPI00000C5927 |
UniProtKB Acc | Q9HZ86 |
UniProtKB ID | Q9HZ86_PSEAE |
UniRef100 | UniRef100_Q9HZ86 |
UniRef50 | UniRef50_G8Q1T5 |
UniRef90 | UniRef90_Q9HZ86 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
nucleotide sugar epimerase/dehydratase WbpM
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (74.42 kDa, PMID:21751344)
|
Charge (pH 7) | 13.78 |
Kyte-Doolittle Hydrophobicity Value | 0.096 |
Molecular Weight (kDa) | 74.4 |
Isoelectric Point (pI) | 9.64 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | VFDB : VF0085 |
Category | LPS O-antigen (P. aeruginosa) |
Evidence |
|
Host Organism | |
Notes | |
Reference |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 435 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002459 (529 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3141
Search term: wbpM
Search term: nucleotide sugar epimerase/dehydratase WbpM
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Molecular characterization of the Pseudomonas aeruginosa serotype O5 (PAO1) B-band lipopolysaccharide gene cluster.
Burrows LL, Charter DF, Lam JS
Mol Microbiol 1996 Nov;22(3):481-95
PubMed ID: 8939432
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|