Pseudomonas aeruginosa PAO1, PA3158 (wbpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009243 O antigen biosynthetic process
EXP
Inferred from Experiment 		ECO:0000269
experimental evidence used in manual assertion		 1982284 Reviewed by curator
Biological Process GO:0000271 polysaccharide biosynthetic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 19282284 Reviewed by curator
Biological Process GO:0006065 UDP-glucuronate biosynthetic process
EXP
Inferred from Experiment 		ECO:0000269
experimental evidence used in manual assertion		 18621892 Reviewed by curator
Molecular Function GO:0003954 NADH dehydrogenase activity
EXP
Inferred from Experiment 		ECO:0000269
experimental evidence used in manual assertion		 18621892 Reviewed by curator
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01408
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class
Putative enzymes Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded
KEGG pae00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP UDP-2,3-diacetamido-2,3-dideoxy-d-mannuronic acid biosynthesis pathway ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.360.10 Dihydrodipicolinate Reductase; domain 2 - - 132 316 9.8E-76
Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain IPR004104 Gfo/Idh/MocA-like oxidoreductase, C-terminal 150 309 5.4E-23
Gene3D G3DSA:3.40.50.720 - - - 1 131 7.7E-33
Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold IPR000683 Gfo/Idh/MocA-like oxidoreductase, N-terminal 3 126 5.1E-23
SUPERFAMILY SSF55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain - - 162 232 1.0E-4
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 3 172 4.98E-24
FunFam G3DSA:3.40.50.720:FF:001389 UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate oxidase - - 1 131 1.6E-90
PANTHER PTHR43249 UDP-N-ACETYL-2-AMINO-2-DEOXY-D-GLUCURONATE OXIDASE - - 3 297 1.9E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.