Pseudomonas aeruginosa PAO1, PA3160 (wzz)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0098567 periplasmic side of plasma membrane
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
9045803 Reviewed by curator
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P0AG00
ECO:0000250
sequence similarity evidence used in manual assertion
20418877 Reviewed by curator
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
24309320 Reviewed by curator
Biological Process GO:0009243 O antigen biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
9045803 Reviewed by curator
Cellular Component GO:0009276 Gram-negative-bacterium-type cell wall
IDA
Inferred from Direct Assay
ECO:0000002
direct assay evidence
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
12534470 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 176 210 -
Gene3D G3DSA:3.30.1890.10 - - - 44 317 4.3E-56
Pfam PF02706 Chain length determinant protein IPR003856 Polysaccharide chain length determinant N-terminal domain 14 108 5.6E-18
PANTHER PTHR32309 TYROSINE-PROTEIN KINASE - - 4 345 9.8E-36
SUPERFAMILY SSF160355 Bacterial polysaccharide co-polymerase-like - - 52 316 4.84E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.