Pseudomonas aeruginosa PAO1, PA3163 (cmk)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009117 nucleotide metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 7836281 Reviewed by curator
Biological Process GO:0006139 nucleobase-containing compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02020
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004127 cytidylate kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02020
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02020
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Nucleotide biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Pyrimidine metabolism ECO:0000037
not_recorded
KEGG pae00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PWY0-163 salvage pathways of pyrimidine ribonucleotides 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00017 JCVI: (d)CMP kinase IPR003136 Cytidylate kinase 6 220 2.2E-81
FunFam G3DSA:3.40.50.300:FF:000262 Cytidylate kinase - - 1 228 5.3E-109
Hamap MF_00238 Cytidylate kinase [cmk]. IPR003136 Cytidylate kinase 6 226 34.651672
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 3 226 2.8E-86
CDD cd02020 CMPK IPR011994 Cytidylate kinase domain 9 207 2.61487E-71
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 7 223 1.12E-45
Pfam PF02224 Cytidylate kinase IPR011994 Cytidylate kinase domain 9 223 6.2E-77
PANTHER PTHR21299 CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASE - - 41 218 7.6E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.