Pseudomonas aeruginosa PAO1, PA3544 (algE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0050896 response to stimulus
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
10411261 Reviewed by curator
Cellular Component GO:0016020 membrane
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
1743507 Reviewed by curator
Biological Process GO:0042121 alginic acid biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
1743507 Reviewed by curator
Biological Process GO:0042121 alginic acid biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
23335756 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc PWY-6082 alginate biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCAP Alginate biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13372 Alginate export IPR025388 Alginate export domain 39 485 4.1E-125
MobiDBLite mobidb-lite consensus disorder prediction - - 102 121 -
MobiDBLite mobidb-lite consensus disorder prediction - - 331 355 -
MobiDBLite mobidb-lite consensus disorder prediction - - 340 355 -
Gene3D G3DSA:2.40.160.100 - - - 33 490 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.