Pseudomonas aeruginosa PAO1, PA5424
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: TGCCGCCCGCC-N12-GGCGGGCGGCA | 6105120 | 6105153 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 6105053 | 6105057 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| VqsM binding site | 6104503 | 6104517 | - |
ECO:0000314
direct assay evidence used in manual assertion |
25034696 | Details |
| Palindrome | 6104769 | 6104790 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1503 | 6104768 | 6104791 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1504 | 6104769 | 6104790 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |