Pseudomonas aeruginosa PAO1, PA5434 (mtr)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015827 tryptophan transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 1987112 Reviewed by curator
Biological Process GO:0003333 amino acid transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03222
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015173 aromatic amino acid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00837
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00837
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006060
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015801 aromatic amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00837
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006060
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF006060
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 296 315 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 330 348 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 47 66 1.0E-98
PIRSF PIRSF006060 IPR002293 Amino acid/polyamine transporter I 2 309 5.7E-11
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 158 178 1.0E-98
PIRSF PIRSF006060 IPR002293 Amino acid/polyamine transporter I 320 414 4.8
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 235 254 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 92 112 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 20 43 1.0E-98
Gene3D G3DSA:1.20.1740.10 8 414 7.4E-10
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 351 370 1.0E-98
TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein IPR013059 Tryptophan/tyrosine transporter 17 398 0.0
Pfam PF03222 Tryptophan/tyrosine permease family IPR018227 Amino acid/polyamine transporter 2 12 405 0.0
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 196 218 1.0E-98

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.