Pseudomonas aeruginosa PAO1, PA5434 (mtr)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015827 tryptophan transport
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 1987112 Reviewed by curator
Biological Process GO:0003333 amino acid transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03222
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015173 aromatic amino acid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR46997
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015801 aromatic amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR46997
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR46997
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF006060 AA_transporter - - 320 414 4.0
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 330 348 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 235 254 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 158 178 1.0E-98
NCBIfam TIGR00837 JCVI: aromatic amino acid transporter IPR013059 Tryptophan/tyrosine transporter 17 398 0.0
PIRSF PIRSF006060 AA_transporter - - 2 309 4.7E-11
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 20 43 1.0E-98
PANTHER PTHR46997 LOW AFFINITY TRYPTOPHAN PERMEASE-RELATED IPR013059 Tryptophan/tyrosine transporter 10 416 0.0
FunFam G3DSA:1.20.1740.10:FF:000019 Tryptophan permease TnaB - - 12 416 0.0
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 351 370 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 92 112 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 196 218 1.0E-98
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 47 66 1.0E-98
Pfam PF03222 Tryptophan/tyrosine permease family IPR018227 Amino acid/polyamine transporter 2 12 405 0.0
PRINTS PR00166 Aromatic amino acid permease signature IPR013059 Tryptophan/tyrosine transporter 296 315 1.0E-98
Gene3D G3DSA:1.20.1740.10 Amino acid/polyamine transporter I - - 9 413 3.9E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.