Pseudomonas aeruginosa PAO1, PA5451 (wzm)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015920 lipopolysaccharide transport
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 9244257 Reviewed by curator
Biological Process GO:0055085 transmembrane transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:Q48478
 ECO:0000250
sequence similarity evidence used in manual assertion		 9244257 Reviewed by curator
Cellular Component GO:0070258 inner membrane pellicle complex
EXP
Inferred from Experiment 		ECO:0000269
experimental evidence used in manual assertion		 23223798 Reviewed by curator
Biological Process GO:0009243 O antigen biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 9244257 Reviewed by curator
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00164
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01061
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01061
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00164
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class
Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30413 INNER MEMBRANE TRANSPORT PERMEASE - - 5 265 1.4E-72
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 183 202 4.6E-6
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 146 170 4.6E-6
Pfam PF01061 ABC-2 type transporter IPR013525 ABC-2 type transporter, transmembrane domain 20 225 9.2E-29
PRINTS PR00164 ABC-2 type transport system membrane protein signature IPR000412 ABC-2 transporter 35 56 4.6E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.