Pseudomonas aeruginosa PAO1, PA5493 (polA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCTCGCCGGA-N51-TCCGGCGAGC | 6186626 | 6186696 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 6186538 | 6186540 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details | |
| Shine-Dalgarno sequence | 6186588 | 6186592 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 6184399 | 6184411 | + |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AlgU binding site | 6183661 | 6183695 | - |
|
Details | |
| AlgU binding site | 6183661 | 6183695 | - |
|
11807066 | Details |
| Rho-independent transcription terminator TERM 1518 | 6183538 | 6183572 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |