Pseudomonas aeruginosa PAO1, PA5499 (zur)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071579 regulation of zinc ion transport
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
24086521 Reviewed by curator
Molecular Function GO:0003677 DNA binding
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
24086521 Reviewed by curator
Biological Process GO:0045892 negative regulation of transcription, DNA-templated
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
24086521 Reviewed by curator
Biological Process GO:0071294 cellular response to zinc ion
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
24086521 Reviewed by curator
Biological Process GO:1900376 regulation of secondary metabolite biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
12426334 Reviewed by curator
Biological Process GO:0006882 cellular zinc ion homeostasis
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
24086521 Reviewed by curator
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01475
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01475
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.10.10:FF:000137 Zinc uptake transcriptional repressor - - 17 105 6.6E-39
Gene3D G3DSA:3.30.1490.190 - IPR043135 Ferric-uptake regulator, C-terminal domain 106 166 2.0E-14
Pfam PF01475 Ferric uptake regulator family IPR002481 Ferric-uptake regulator 35 154 2.3E-11
FunFam G3DSA:3.30.1490.190:FF:000007 Fur family transcriptional regulator - - 106 164 8.1E-26
CDD cd07153 Fur_like IPR002481 Ferric-uptake regulator 43 158 1.18305E-22
PANTHER PTHR33202 ZINC UPTAKE REGULATION PROTEIN IPR002481 Ferric-uptake regulator 19 166 1.4E-25
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 17 105 2.8E-26
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 29 159 4.25E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.