Pseudomonas aeruginosa PAO1, PA0008 (glyS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006520 cellular amino acid metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0006426 glycyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004814 arginine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00836
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004820 glycine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01045
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006420 arginyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00836
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class
Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc TRNA-CHARGING-PWY tRNA charging 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Glycine, serine and threonine metabolism ECO:0000037
not_recorded
PseudoCAP Aminoacyl-tRNA biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. IPR015944 Glycine-tRNA ligase, beta subunit 3 683 25.420588
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 50 62 2.6E-35
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 7 20 2.6E-35
NCBIfam TIGR00211 JCVI: glycine--tRNA ligase subunit beta IPR015944 Glycine-tRNA ligase, beta subunit 5 683 0.0
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 334 485 4.5E-17
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 389 408 2.6E-35
Pfam PF02092 Glycyl-tRNA synthetase beta subunit IPR015944 Glycine-tRNA ligase, beta subunit 6 544 0.0
PANTHER PTHR30075 GLYCYL-TRNA SYNTHETASE IPR006194 Glycine-tRNA synthetase, heterodimeric 3 683 0.0
Pfam PF05746 DALR anticodon binding domain IPR008909 DALR anticodon binding 577 671 1.3E-6
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 241 256 2.6E-35
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 313 329 2.6E-35
SMART SM00836 dalr_1_4 IPR008909 DALR anticodon binding 580 683 0.0029

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.