Pseudomonas aeruginosa PAO1, PA0019 (def)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Molecular Function GO:0042586 peptide deformylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00163
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 33 62 4.7E-39
Coils Coil Coil - - 157 168 -
PIRSF PIRSF004749 Pep_def IPR023635 Peptide deformylase 1 168 5.1E-60
Pfam PF01327 Polypeptide deformylase IPR023635 Peptide deformylase 4 153 4.7E-53
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 90 101 4.7E-39
FunFam G3DSA:3.90.45.10:FF:000001 Peptide deformylase - - 1 168 1.9E-87
Hamap MF_00163 Peptide deformylase [def]. IPR023635 Peptide deformylase 2 163 32.206104
Gene3D G3DSA:3.90.45.10 Peptide deformylase IPR036821 Peptide deformylase superfamily 1 168 9.8E-68
SUPERFAMILY SSF56420 Peptide deformylase IPR036821 Peptide deformylase superfamily 2 165 2.09E-64
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 121 150 4.7E-39
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 102 120 4.7E-39
NCBIfam TIGR00079 JCVI: peptide deformylase IPR023635 Peptide deformylase 4 161 1.3E-55
PANTHER PTHR10458 PEPTIDE DEFORMYLASE IPR023635 Peptide deformylase 3 163 4.2E-53
CDD cd00487 Pep_deformylase IPR023635 Peptide deformylase 6 144 2.71506E-79

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.