Pseudomonas aeruginosa PAO1, PA0021

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009294 DNA mediated transformation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00732
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.450 - - - 1 292 8.8E-106
NCBIfam TIGR00732 JCVI: DNA-processing protein DprA IPR003488 DNA recombination-mediator protein A 75 291 5.2E-74
Pfam PF02481 DNA recombination-mediator protein A IPR003488 DNA recombination-mediator protein A 81 283 7.6E-75
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 293 359 6.8E-9
Pfam PF17782 DprA winged helix domain IPR041614 DprA, winged helix domain 297 355 7.0E-9
PANTHER PTHR43022 PROTEIN SMF IPR003488 DNA recombination-mediator protein A 5 360 2.1E-97
SUPERFAMILY SSF102405 MCP/YpsA-like - - 85 293 1.53E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.