Pseudomonas putida HB3267, B479_06440 (cobS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008818 cobalamin 5'-phosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02654
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02654
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc 5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc phenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc adenosylcobalamin biosynthesis from adenosylcobinamide-GDP II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG ppuh00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc superpathway of adenosylcobalamin salvage from cobinamide II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG ppuh01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc 4-methylphenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc 5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR34148 ADENOSYLCOBINAMIDE-GDP RIBAZOLETRANSFERASE IPR003805 Adenosylcobinamide-GDP ribazoletransferase 4 238 1.5E-51
Pfam PF02654 Cobalamin-5-phosphate synthase IPR003805 Adenosylcobinamide-GDP ribazoletransferase 7 233 1.4E-50
Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. IPR003805 Adenosylcobinamide-GDP ribazoletransferase 1 240 48.016132
NCBIfam TIGR00317 JCVI: adenosylcobinamide-GDP ribazoletransferase IPR003805 Adenosylcobinamide-GDP ribazoletransferase 4 236 5.7E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.