Pseudomonas putida HB3267, B479_06450

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00347	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00347	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12802	MarR family	IPR000835	MarR-type HTH domain	30	85	7.0E-10
SMART	SM00347	marrlong4	IPR000835	MarR-type HTH domain	24	123	3.7E-12
PRINTS	PR00598	Bacterial regulatory protein MarR family signature	IPR000835	MarR-type HTH domain	48	64	8.4E-6
PRINTS	PR00598	Bacterial regulatory protein MarR family signature	IPR000835	MarR-type HTH domain	113	133	8.4E-6
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	4	133	3.35E-31
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	1	134	5.0E-34
PRINTS	PR00598	Bacterial regulatory protein MarR family signature	IPR000835	MarR-type HTH domain	83	99	8.4E-6
PANTHER	PTHR33164	TRANSCRIPTIONAL REGULATOR, MARR FAMILY	IPR039422	Transcription regulators MarR/SlyA-like	5	134	5.3E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.