Pseudomonas putida HB3267, B479_18565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuh02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppuh02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00260 chew_2 IPR002545 CheW-like domain 146 281 5.9E-18
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 150 282 6.6E-14
CDD cd00588 CheW_like - - 152 280 2.74273E-17
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 148 282 9.29E-16
PIRSF PIRSF020479 UCP020479_CheW IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like 1 296 3.4E-118

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.