Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
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|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | psb03070 | Bacterial secretion system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | psb02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
NCBIfam | TIGR03344 | JCVI: type VI secretion system tube protein TssD/Hcp | IPR008514 | Type VI secretion system effector Hcp | 1 | 140 | 8.0E-18 |
SUPERFAMILY | SSF141452 | Hcp1-like | IPR036624 | Hcp1-like superfamily | 3 | 161 | 2.09E-43 |
Pfam | PF05638 | Type VI secretion system effector, Hcp | IPR008514 | Type VI secretion system effector Hcp | 6 | 137 | 1.7E-35 |
Gene3D | G3DSA:2.30.110.20 | - | IPR036624 | Hcp1-like superfamily | 3 | 162 | 1.1E-44 |
PANTHER | PTHR36152 | CYTOPLASMIC PROTEIN-RELATED | - | - | 3 | 155 | 3.0E-30 |