Pseudomonas aeruginosa UCBPP-PA14, PA14_00600

Cytoplasmic Membrane
Outer Membrane
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00093 HTH_XRE IPR001387 Cro/C1-type helix-turn-helix domain 4 61 2.37496E-10
Gene3D G3DSA: - IPR010982 Lambda repressor-like, DNA-binding domain superfamily 1 75 8.9E-14
SUPERFAMILY SSF47413 lambda repressor-like DNA-binding domains IPR010982 Lambda repressor-like, DNA-binding domain superfamily 1 65 1.75E-13
SMART SM00530 mbf_short4 IPR001387 Cro/C1-type helix-turn-helix domain 6 61 3.3E-10
Pfam PF01381 Helix-turn-helix IPR001387 Cro/C1-type helix-turn-helix domain 9 61 3.3E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.