Pseudomonas aeruginosa UCBPP-PA14, PA14_01030 (hcp1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR36152 CYTOPLASMIC PROTEIN-RELATED - - 1 161 8.2E-75
PANTHER PTHR36152:SF5 PROTEIN HCP1 - - 1 161 8.2E-75
SUPERFAMILY SSF141452 Hcp1-like IPR036624 Hcp1-like superfamily 2 160 2.88E-58
TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family IPR008514 Type VI secretion system effector Hcp 13 144 9.0E-17
Gene3D G3DSA:2.30.110.20 - IPR036624 Hcp1-like superfamily 1 162 2.9E-61
Pfam PF05638 Type VI secretion system effector, Hcp IPR008514 Type VI secretion system effector Hcp 6 136 1.6E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.