Pseudomonas aeruginosa UCBPP-PA14, PA14_01560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 43 113 1.6E-36
SUPERFAMILY SSF57783 Zinc beta-ribbon - - 3 37 2.13E-15
FunFam G3DSA:2.20.25.10:FF:000003 Alkylphosphonate utilization protein PhnA - - 1 42 1.1E-23
Pfam PF03831 PhnA domain IPR013988 Protein YjdM, C-terminal 46 113 6.9E-33
PANTHER PTHR30305 UNCHARACTERIZED - - 8 112 3.7E-17
SUPERFAMILY SSF82057 Prokaryotic SH3-related domain - - 41 113 9.16E-29
Pfam PF08274 PhnA Zinc-Ribbon IPR013987 Protein YjdM, N-terminal 3 32 4.0E-17
Gene3D G3DSA:2.20.25.10 - - - 1 42 7.1E-23
NCBIfam TIGR00686 JCVI: zinc ribbon domain-containing protein YjdM IPR004624 Protein YjdM 4 112 8.7E-50
FunFam G3DSA:2.30.30.40:FF:000013 Alkylphosphonate utilization protein PhnA - - 44 113 1.5E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.