Pseudomonas aeruginosa UCBPP-PA14, PA14_02690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1740.10 Amino acid/polyamine transporter I - - 12 447 5.6E-63
FunFam G3DSA:1.20.1740.10:FF:000079 Amino acid APC family transporter - - 12 447 0.0
Pfam PF13520 Amino acid permease IPR002293 Amino acid/polyamine transporter I 21 411 1.3E-38
PANTHER PTHR42770 AMINO ACID TRANSPORTER-RELATED - - 11 430 8.4E-55
PIRSF PIRSF006060 AA_transporter - - 2 472 1.6E-81

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.