Pseudomonas aeruginosa UCBPP-PA14, PA14_02730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR12128
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00300 Lysine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00261 Monobactam biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 3 293 1.2E-90
CDD cd00408 DHDPS-like - - 8 289 1.48072E-99
PIRSF PIRSF001365 DHDPS IPR002220 DapA-like 1 293 1.9E-86
PANTHER PTHR12128 DIHYDRODIPICOLINATE SYNTHASE IPR002220 DapA-like 4 284 1.2E-55
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 131 148 1.8E-10
SMART SM01130 DHDPS_2 IPR002220 DapA-like 4 293 5.5E-99
Pfam PF00701 Dihydrodipicolinate synthetase family IPR002220 DapA-like 6 290 3.3E-55
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 38 59 1.8E-10
SUPERFAMILY SSF51569 Aldolase - - 3 292 2.09E-85
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 74 92 1.8E-10
PRINTS PR00146 Dihydrodipicolinate synthase signature IPR002220 DapA-like 106 122 1.8E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.