Pseudomonas aeruginosa UCBPP-PA14, PA14_05180 (pilT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043108 pilus retraction
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0395
 ECO:0000249
sequence similarity evidence used in automatic assertion		 20595000
Cellular Component GO:0044096 type IV pilus
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0395
 ECO:0000249
sequence similarity evidence used in automatic assertion		 20595000
Biological Process GO:0043107 type IV pilus-dependent motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0395
 ECO:0000249
sequence similarity evidence used in automatic assertion		 20595000
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01420
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class
Motility & Attachment Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.450.90:FF:000002 Twitching motility protein PilT - - 1 100 5.9E-52
Gene3D G3DSA:3.30.450.90 - - - 1 100 1.0E-35
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 11 271 4.1E-48
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 5 335 1.69E-72
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 101 344 2.2E-92
CDD cd01131 PilT IPR006321 Pilus retraction protein PilT/PilU 103 324 0.0
PANTHER PTHR30486 TWITCHING MOTILITY PROTEIN PILT - - 10 338 1.4E-75
FunFam G3DSA:3.40.50.300:FF:000872 Twitching motility protein PilT - - 101 344 0.0
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 122 256 0.0063
NCBIfam TIGR01420 JCVI: PilT/PilU family type 4a pilus ATPase IPR006321 Pilus retraction protein PilT/PilU 3 342 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.