Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:cd06170
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 6 | 139 | 5.4E-10 |
CDD | cd00130 | PAS | IPR000014 | PAS domain | 153 | 252 | 7.1617E-5 |
NCBIfam | TIGR00229 | JCVI: PAS domain S-box protein | IPR000014 | PAS domain | 140 | 262 | 5.6E-13 |
Pfam | PF13188 | PAS domain | IPR000014 | PAS domain | 14 | 68 | 8.8E-7 |
SUPERFAMILY | SSF46894 | C-terminal effector domain of the bipartite response regulators | IPR016032 | Signal transduction response regulator, C-terminal effector | 416 | 485 | 2.28E-20 |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 440 | 456 | 2.1E-11 |
SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 267 | 336 | 0.081 |
SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 13 | 84 | 0.074 |
CDD | cd00130 | PAS | IPR000014 | PAS domain | 276 | 376 | 2.33939E-5 |
Pfam | PF13426 | PAS domain | IPR000014 | PAS domain | 159 | 251 | 4.3E-4 |
SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 255 | 377 | 1.92E-15 |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 456 | 468 | 2.1E-11 |
NCBIfam | TIGR00229 | JCVI: PAS domain S-box protein | IPR000014 | PAS domain | 263 | 386 | 1.6E-8 |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 426 | 440 | 2.1E-11 |
Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 140 | 252 | 2.9E-13 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 400 | 483 | 1.9E-24 |
Coils | Coil | Coil | - | - | 255 | 275 | - |
SMART | SM00421 | luxrmega5 | IPR000792 | Transcription regulator LuxR, C-terminal | 423 | 480 | 3.8E-24 |
CDD | cd06170 | LuxR_C_like | IPR000792 | Transcription regulator LuxR, C-terminal | 426 | 482 | 4.21573E-17 |
Pfam | PF00196 | Bacterial regulatory proteins, luxR family | IPR000792 | Transcription regulator LuxR, C-terminal | 426 | 480 | 5.7E-18 |
Pfam | PF13426 | PAS domain | IPR000014 | PAS domain | 281 | 377 | 6.0E-8 |
SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 10 | 135 | 4.54E-7 |
SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 136 | 251 | 2.79E-14 |
Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 254 | 376 | 2.0E-16 |
SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 142 | 209 | 0.063 |
PANTHER | PTHR43214 | TWO-COMPONENT RESPONSE REGULATOR | IPR039420 | Transcriptional regulatory protein WalR-like | 4 | 484 | 5.5E-47 |