Pseudomonas aeruginosa UCBPP-PA14, PA14_07530 (dnaG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10410
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.580.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006260 DNA replication
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.580.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003896 DNA primase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00974
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00974
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006269 DNA replication, synthesis of RNA primer
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00974
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau03030 DNA replication 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF57783 Zinc beta-ribbon - - 4 101 1.7E-37
Gene3D G3DSA:3.40.1360.10 - - - 244 366 2.0E-43
MobiDBLite mobidb-lite consensus disorder prediction - - 484 513 -
FunFam G3DSA:3.90.980.10:FF:000001 DNA primase - - 111 243 1.9E-49
SMART SM00766 dnag_dnab_bind_seq8d IPR013173 DNA primase DnaG, DnaB-binding domain 526 654 9.3E-34
Pfam PF01807 CHC2 zinc finger IPR002694 Zinc finger, CHC2-type 6 101 8.1E-42
SMART SM00400 primzinc3 IPR002694 Zinc finger, CHC2-type 36 90 1.8E-34
Gene3D G3DSA:3.90.980.10 - IPR037068 DNA primase, catalytic core, N-terminal domain superfamily 114 243 7.0E-49
Pfam PF13662 Toprim domain IPR006171 TOPRIM domain 262 330 9.3E-18
SMART SM00493 toprim5 IPR006171 TOPRIM domain 262 333 2.8E-21
SUPERFAMILY SSF56731 DNA primase core - - 117 427 7.19E-110
Pfam PF10410 DnaB-helicase binding domain of primase IPR019475 DNA primase, DnaB-helicase binding domain 374 426 7.5E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 94 108 -
PANTHER PTHR30313 DNA PRIMASE - - 1 659 0.0
Hamap MF_00974 DNA primase [dnaG]. IPR030846 DNA primase DnaG, bacteria 4 655 30.061859
NCBIfam TIGR01391 JCVI: DNA primase IPR006295 DNA primase, DnaG 5 421 0.0
CDD cd03364 TOPRIM_DnaG_primases IPR034151 Bacterial DnaG primase, TOPRIM domain 262 343 2.19478E-36
FunFam G3DSA:3.90.580.10:FF:000001 DNA primase - - 1 101 3.7E-43
Gene3D G3DSA:1.10.860.10 DNAb Helicase; Chain A IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal 514 662 8.9E-29
Gene3D G3DSA:1.20.50.20 DnaG, RNA polymerase domain, helical bundle - - 367 429 2.6E-21
Gene3D G3DSA:3.90.580.10 - IPR036977 DNA Primase, CHC2-type zinc finger 2 102 1.4E-36
FunFam G3DSA:3.40.1360.10:FF:000002 DNA primase - - 244 371 3.5E-56
MobiDBLite mobidb-lite consensus disorder prediction - - 471 521 -
MobiDBLite mobidb-lite consensus disorder prediction - - 94 115 -
Pfam PF08278 DNA primase DnaG DnaB-binding IPR013173 DNA primase DnaG, DnaB-binding domain 530 652 3.0E-22
Pfam PF08275 DNA primase catalytic core, N-terminal domain IPR013264 DNA primase, catalytic core, N-terminal 127 255 6.4E-43
SUPERFAMILY SSF117023 DNA primase DnaG, C-terminal domain - - 525 654 7.85E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.