Pseudomonas aeruginosa UCBPP-PA14, PA14_07620 (cca)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01743
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0001680 tRNA 3'-terminal CCA addition
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01262
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006396 RNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01743
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01262
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004810 tRNA adenylyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01262
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01262
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd05398 NT_ClassII-CCAase IPR002646 Poly A polymerase, head domain 1 118 1.51407E-30
PANTHER PTHR47545 MULTIFUNCTIONAL CCA PROTEIN - - 1 403 0.0
FunFam G3DSA:1.10.3090.10:FF:000001 Multifunctional CCA protein - - 125 354 2.3E-120
SUPERFAMILY SSF81301 Nucleotidyltransferase IPR043519 Nucleotidyltransferase superfamily 1 119 1.42E-29
Gene3D G3DSA:3.30.460.10 Beta Polymerase, domain 2 IPR043519 Nucleotidyltransferase superfamily 1 124 1.2E-27
Pfam PF01743 Poly A polymerase head domain IPR002646 Poly A polymerase, head domain 4 122 4.0E-18
CDD cd00077 HDc IPR003607 HD/PDEase domain 227 316 1.65013E-5
SUPERFAMILY SSF81891 Poly A polymerase C-terminal region-like - - 120 401 1.83E-52
Hamap MF_01262 CCA-adding enzyme [cca]. IPR012006 tRNA nucleotidyltransferase, proteobacteria 1 401 41.368973
PIRSF PIRSF000813 CCA_bact IPR012006 tRNA nucleotidyltransferase, proteobacteria 1 408 0.0
Hamap MF_01261 Multifunctional CCA protein [cca]. IPR012006 tRNA nucleotidyltransferase, proteobacteria 1 407 55.269753
Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain 149 212 5.9E-13
Pfam PF01966 HD domain IPR006674 HD domain 231 320 9.7E-8
Gene3D G3DSA:1.10.3090.10 - - - 125 352 2.8E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.