Pseudomonas aeruginosa UCBPP-PA14, PA14_07730 (ksgA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006364 rRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00607
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000154 rRNA modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00650
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008649 rRNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00650
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00607
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00398 Ribosomal RNA adenine dimethylase IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm 7 261 2.7E-64
Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. IPR011530 Ribosomal RNA adenine dimethylase 7 262 58.020882
FunFam G3DSA:1.10.8.100:FF:000001 Ribosomal RNA small subunit methyltransferase A - - 199 264 1.0E-25
PANTHER PTHR11727 DIMETHYLADENOSINE TRANSFERASE IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm 6 265 2.0E-68
Gene3D G3DSA:1.10.8.100 - IPR023165 rRNA adenine dimethylase-like, C-terminal 198 263 5.9E-23
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 3 195 4.0E-70
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 7 264 1.41E-79
NCBIfam TIGR00755 JCVI: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA IPR011530 Ribosomal RNA adenine dimethylase 7 261 7.3E-83
SMART SM00650 rADcneu6 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal 23 195 4.0E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.