Pseudomonas aeruginosa UCBPP-PA14, PA14_46220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0019808 polyamine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015846 polyamine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 26 329 0.0
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 72 86 4.5E-64
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 45 66 4.5E-64
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 24 362 1.01E-99
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 152 166 4.5E-64
PIRSF PIRSF019574 Periplasmic_polyamine_BP IPR001188 Spermidine/putrescine-binding periplasmic protein 2 363 0.0
Gene3D G3DSA:3.40.190.10 - - - 130 357 0.0
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 88 101 4.5E-64
CDD cd13659 PBP2_PotF - - 26 356 0.0
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 29 45 4.5E-64
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 121 137 4.5E-64
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 262 281 4.5E-64
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 175 194 4.5E-64
Pfam PF13416 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein 40 327 2.4E-31
PANTHER PTHR30222 SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN - - 14 359 2.1E-93
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 307 333 4.5E-64
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 212 231 4.5E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.