Pseudomonas aeruginosa UCBPP-PA14, PA14_46320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02786
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | candicidin biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | fatty acid biosynthesis initiation I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | 3-hydroxypropanoate/4-hydroxybutanate cycle | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | glyoxylate assimilation | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | 3-hydroxypropanoate cycle | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00289 | Biotin carboxylase, N-terminal domain | IPR005481 | Biotin carboxylase-like, N-terminal domain | 5 | 112 | 4.2E-39 |
| Gene3D | G3DSA:3.90.226.10 | - | - | - | 842 | 1095 | 3.9E-76 |
| Gene3D | G3DSA:3.30.470.20 | - | - | - | 206 | 462 | 6.6E-95 |
| Pfam | PF02785 | Biotin carboxylase C-terminal domain | IPR005482 | Biotin carboxylase, C-terminal | 343 | 451 | 7.1E-29 |
| Gene3D | G3DSA:3.30.1490.20 | - | IPR013815 | ATP-grasp fold, subdomain 1 | 134 | 204 | 8.7E-22 |
| Pfam | PF02786 | Carbamoyl-phosphate synthase L chain, ATP binding domain | IPR005479 | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain | 117 | 327 | 1.5E-57 |
| Pfam | PF01039 | Carboxyl transferase domain | IPR034733 | Acetyl-CoA carboxylase | 605 | 1077 | 9.2E-70 |
| SUPERFAMILY | SSF52096 | ClpP/crotonase | IPR029045 | ClpP/crotonase-like domain superfamily | 842 | 1081 | 5.68E-66 |
| Gene3D | G3DSA:2.40.50.100 | - | - | - | 492 | 559 | 7.1E-17 |
| Gene3D | G3DSA:3.40.50.20 | - | - | - | 1 | 133 | 9.4E-48 |
| SUPERFAMILY | SSF51246 | Rudiment single hybrid motif | IPR011054 | Rudiment single hybrid motif | 338 | 457 | 6.28E-30 |
| Gene3D | G3DSA:3.90.226.10 | - | - | - | 561 | 834 | 7.1E-75 |
| CDD | cd06850 | biotinyl_domain | - | - | 494 | 557 | 7.57506E-21 |
| PANTHER | PTHR48095 | PYRUVATE CARBOXYLASE SUBUNIT A | - | - | 3 | 533 | 0.0 |
| Pfam | PF00364 | Biotin-requiring enzyme | IPR000089 | Biotin/lipoyl attachment | 493 | 555 | 4.0E-12 |
| SUPERFAMILY | SSF52096 | ClpP/crotonase | IPR029045 | ClpP/crotonase-like domain superfamily | 581 | 837 | 6.97E-48 |
| SUPERFAMILY | SSF56059 | Glutathione synthetase ATP-binding domain-like | - | - | 85 | 334 | 3.71E-56 |
| SUPERFAMILY | SSF51230 | Single hybrid motif | IPR011053 | Single hybrid motif | 486 | 558 | 1.31E-15 |
| SMART | SM00878 | Biotin_carb_C_2 | IPR005482 | Biotin carboxylase, C-terminal | 343 | 451 | 4.5E-46 |
| SUPERFAMILY | SSF52440 | PreATP-grasp domain | IPR016185 | Pre-ATP-grasp domain superfamily | 3 | 114 | 1.58E-38 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.