Pseudomonas aeruginosa UCBPP-PA14, PA14_47730 (cobD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00380
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0048472 threonine-phosphate decarboxylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00380
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00380
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. IPR004485 Cobalamin biosynthesis CobD/CbiB 1 312 108.25
TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD IPR004485 Cobalamin biosynthesis CobD/CbiB 8 305 9.4E-58
Pfam PF03186 CobD/Cbib protein IPR004485 Cobalamin biosynthesis CobD/CbiB 7 290 7.2E-96
Pfam PF17113 Regulatory signalling modulator protein AmpE IPR031347 Protein AmpE 156 229 3.5E-6

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.