Pseudomonas aeruginosa UCBPP-PA14, PA14_47800

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015889 cobalamin transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01779
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015420 ATPase-coupled vitamin B12 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01779
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01779
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 185 614 9.3E-48
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 43 147 8.4E-30
TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor IPR010101 TonB-dependent vitamin B12 transporter BtuB 1 615 0.0
Gene3D G3DSA:2.170.130.10 IPR037066 TonB-dependent receptor, plug domain superfamily 29 152 9.7E-39
SUPERFAMILY SSF56935 31 613 1.57E-121
CDD cd01347 ligand_gated_channel 48 614 1.72478E-79
Gene3D G3DSA:2.40.170.20 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 158 614 2.2E-123

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.