Pseudomonas aeruginosa UCBPP-PA14, PA14_48300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 19 412 5.2E-43
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 10 429 2.5E-49
NCBIfam TIGR00711 JCVI: DHA2 family efflux MFS transporter permease subunit IPR004638 Drug resistance transporter EmrB-like 19 494 9.3E-107
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 7 500 6.28E-60
PANTHER PTHR23501 MAJOR FACILITATOR SUPERFAMILY - - 7 498 1.9E-80
CDD cd17503 MFS_LmrB_MDR_like - - 19 487 6.83113E-93

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.