Pseudomonas aeruginosa UCBPP-PA14, PA14_49160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00130 PAS IPR000014 PAS domain 439 540 5.98449E-8
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 857 1114 1.2E-80
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 685 842 1.3E-42
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 865 1112 1.44E-74
CDD cd00130 PAS IPR000014 PAS domain 564 671 5.72489E-7
Pfam PF08447 PAS fold IPR013655 PAS fold-3 324 406 9.6E-11
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 539 668 1.92E-19
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 435 544 1.31E-16
Gene3D G3DSA:3.30.450.20 PAS domain - - 296 435 1.1E-23
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 552 681 2.8E-9
CDD cd00130 PAS IPR000014 PAS domain 309 412 1.82504E-8
SMART SM00086 pac_2 IPR001610 PAC motif 373 415 1.3E-7
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 307 418 6.6E-21
Pfam PF08448 PAS fold IPR013656 PAS fold-4 563 675 1.2E-11
SMART SM00267 duf1_3 IPR000160 GGDEF domain 674 846 1.3E-58
SMART SM00052 duf2_2 IPR001633 EAL domain 858 1105 1.3E-77
SMART SM00091 pas_2 IPR000014 PAS domain 555 624 1.1E-6
SMART SM00086 pac_2 IPR001610 PAC motif 501 543 2.3E-8
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 674 848 2.9E-55
Gene3D G3DSA:2.10.70.100 - - - 498 543 1.2E-12
CDD cd01948 EAL IPR001633 EAL domain 866 1104 4.56639E-85
Pfam PF05231 MASE1 IPR007895 MASE1 15 289 2.6E-16
CDD cd01949 GGDEF IPR000160 GGDEF domain 687 843 9.04541E-59
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 683 845 2.1E-41
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 280 426 0.0
Pfam PF00563 EAL domain IPR001633 EAL domain 866 1100 3.6E-61
Gene3D G3DSA:3.30.450.20 PAS domain - - 544 672 5.3E-21
Coils Coil Coil - - 415 435 -
SMART SM00091 pas_2 IPR000014 PAS domain 300 366 7.2E-6
Pfam PF08447 PAS fold IPR013655 PAS fold-3 450 537 4.9E-17
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 299 421 1.5E-25
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 679 847 8.2E-45
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 690 846 3.14E-47
SMART SM00091 pas_2 IPR000014 PAS domain 427 495 5.2
SMART SM00086 pac_2 IPR001610 PAC motif 632 674 120.0
Gene3D G3DSA:3.30.450.20 PAS domain - - 438 496 1.2E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.