Pseudomonas aeruginosa UCBPP-PA14, PA14_52740 (argR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1900081 regulation of arginine catabolic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0893
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9286981
Biological Process GO:1900079 regulation of arginine biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0893
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9286981
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00032
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00032
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class
Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43280 ARAC-FAMILY TRANSCRIPTIONAL REGULATOR - - 164 314 3.6E-29
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 294 310 4.8E-5
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 210 261 1.43E-8
CDD cd03136 GATase1_AraC_ArgR_like - - 8 189 1.37265E-49
MobiDBLite mobidb-lite consensus disorder prediction - - 307 329 -
FunFam G3DSA:3.40.50.880:FF:000074 Transcriptional regulator ArgR - - 2 200 1.8E-128
Gene3D G3DSA:3.40.50.880 - IPR029062 Class I glutamine amidotransferase-like 2 200 3.4E-32
FunFam G3DSA:1.10.10.60:FF:000090 Transcriptional regulator ArgR, AraC family - - 207 312 2.2E-57
Pfam PF12833 Helix-turn-helix domain IPR018060 DNA binding HTH domain, AraC-type 233 311 1.4E-23
Gene3D G3DSA:1.10.10.60 - - - 207 315 7.1E-31
SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like IPR029062 Class I glutamine amidotransferase-like 5 192 3.41E-24
SMART SM00342 aracneu4 IPR018060 DNA binding HTH domain, AraC-type 227 310 1.3E-33
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 263 314 1.16E-12
PRINTS PR00032 AraC bacterial regulatory protein HTH signature IPR020449 Transcription regulator HTH, AraC- type 279 294 4.8E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.