Pseudomonas aeruginosa UCBPP-PA14, PA14_53260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pau00290 | Valine, leucine and isoleucine biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pau01200 | Carbon metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pau01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pau01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pau01230 | Biosynthesis of amino acids | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pau00260 | Glycine, serine and threonine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pau01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | IPR001926 | Tryptophan synthase beta chain-like, PALP domain | 21 | 304 | 3.4E-64 |
| PANTHER | PTHR48078 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED | - | - | 19 | 313 | 1.1E-64 |
| Gene3D | G3DSA:3.40.50.1100 | - | IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | 51 | 148 | 2.0E-73 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | 7 | 312 | 5.89E-74 |
| FunFam | G3DSA:3.40.50.1100:FF:000076 | Threonine dehydratase | - | - | 51 | 148 | 1.6E-49 |
| CDD | cd01562 | Thr-dehyd | - | - | 5 | 308 | 1.07676E-112 |
| Gene3D | G3DSA:3.40.50.1100 | - | IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | 19 | 308 | 2.0E-73 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.