Pseudomonas aeruginosa UCBPP-PA14, PA14_72420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS50887 GGDEF domain profile. IPR000160 GGDEF domain 541 671 33.161
MobiDBLite mobidb-lite consensus disorder prediction 277 297 -
MobiDBLite mobidb-lite consensus disorder prediction 204 226 -
Gene3D G3DSA:3.30.70.270 505 671 8.6E-58
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 511 667 1.9E-46
Coils Coil 458 496 -
SUPERFAMILY SSF55073 IPR029787 Nucleotide cyclase 516 669 3.69E-48
CDD cd01949 GGDEF IPR000160 GGDEF domain 512 667 4.89358E-64
SMART SM00267 IPR000160 GGDEF domain 501 671 2.5E-56
TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 509 670 1.8E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.